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SELECT – Fossil temporal dynamics of phenotypic selection & life history evolution

Fossil bryozoans

Scanning Electron Microscopy image of a species of Microporella from New Zealand (50X)

Darwin's theory of natural selection is one of the pillars of evolutionary theory. It has shaped the diversity of organisms we see both living today and preserved in the fossil record.

However, even though fossils offer a direct window into selection in the deep past, many aspects of selection have only been studied in contemporary populations. The main obstacle to studying the "goodness of fit" of long extinct organisms to the environments in which they lived is the difficulty of measuring fitness. 

The overarching goal of SELECT is to solve this fundamental challenge by merging theoretical models from quantitative genetics with paleontological data using a novel model system, cheilostome bryozoans, thus significantly contributing to an integrated understanding of evolution across time-scales.

Bryozoans on a shell
Bryozoan-encrusted shell from the Pleistocene Nukumaru Limestone at Waiinu beach, (Wanganui Basin, New Zealand)

Objectives

  1. Quantify past multivariate selection gradients for related species using fossil populations;
  2. Compare selection and rate of evolution in life-history versus non-life-history phenotypic traits;
  3. Estimate how ecological interactions affect phenotypic traits;
  4. Assess if and how life-history traits contribute to diversification dynamics.

These objectives will be achieved by compiling data from existing field samples aided by rapid phenotyping using a new automated machine-learning algorithm.

Cheilostome bryozoans as a model system

Cheilostome bryozoans are an optimal model system to study selection in fossil populations. They have an excellent fossil record; they are rich in species-level traits that are regularly preserved such that morphological species are identified with ease; their skeletal morphology corresponds to genetic species; an estimate for fecundity, a fitness component, can be gleaned from their preserved morphology; and their colonial nature allows to disentangle genetic effect along with environmental effect based on the variance in morphological traits.

Image may contain: Sky, Water, Cloud, Bedrock, Wood.
One of the Pleistocene shellbeds outcropping at Castlecliff beach (Wanganui Basin, New Zealand) from which fossil samples of Microporella have been collected

Methodology

SELECT will use c. 10,000 fossil and modern colonies of five species of the cheilostome bryozoan genus Microporella from 10 different populations covering a time-interval from 2.3 million years and up to the Recent. Samples were collected in the Wanganui Basin (North Island, New Zealand), which contains the most complete and high-resolution stratigraphic record in the world for the Pleistocene. Measurements will be automated using a cutting-edge machine-learning tool to extract quantitative phenotypic data from SEM images.

Image of bryozoans in analysis software
Example of the deep-learning segmentation tool on a fossil colony of Microporella from Wanganui. Distinctive morphological traits are colour-coded (e.g. feeding modules in light blue, reproductive structures in pink, defensive structures in brown, etc.)

Publications

  • Kannan, Gunasekaran; Mghili, Bilal; Di Martino, Emanuela; Sanchez-Vidal, Anna & Figuerola, Blanca (2023). Increasing risk of invasions by organisms on marine debris in the Southeast coast of India. Marine Pollution Bulletin. ISSN 0025-326X. 195. doi: 10.1016/j.marpolbul.2023.115469. Full text in Research Archive
  • Di Martino, Emanuela; Berning, Björn; Gordon, Dennis P; Kuklinski, Piotr; Liow, Lee Hsiang & Ramsfjell, Mali Hamre [Show all 12 contributors for this article] (2023). DeepBryo: A web app for AI-assisted morphometric characterization of cheilostome bryozoans. Limnology and Oceanography : Methods. ISSN 1541-5856. doi: 10.1002/lom3.10563. Full text in Research Archive
  • Di Martino, Emanuela (2023). Scanning electron microscopy study of Lars Silén’s cheilostome bryozoan type specimens in the historical collections of natural history museums in Sweden. Zootaxa. ISSN 1175-5326. 5379(1), p. 1–106. doi: 10.11646/zootaxa.5379.1.1.
  • Rosso, Antonietta & Di Martino, Emanuela (2023). Capturing the moment: a snapshot of Mediterranean bryozoan diversity in the early 2023. Mediterranean Marine Science. ISSN 1108-393X. Full text in Research Archive
  • Di Martino, Emanuela & Liow, Lee Hsiang (2022). Changing allometric relationships among fossil and Recent populations in two colonial species. Evolution. ISSN 0014-3820. 76(10), p. 2424–2435. doi: 10.1111/evo.14598. Full text in Research Archive
  • Di Martino, Emanuela (2022). Revision of the type species of some cheilostome bryozoan genera in the collection of the Swedish Museum of Natural History. Zootaxa. ISSN 1175-5326. 5125(2), p. 157–181. doi: 10.11646/ZOOTAXA.5125.2.4.
  • Ramsfjell, Mali Hamre; Taylor, Paul D. & Di Martino, Emanuela (2022). New early Miocene species of the cheilostome bryozoan Microporella from the South Island of New Zealand. Alcheringa. ISSN 0311-5518. 46(2), p. 208–217. doi: 10.1080/03115518.2022.2084564. Full text in Research Archive
  • Di Martino, Emanuela; Rosso, Antonietta & Mandic, Oleg (2022). Systematic revision and scanning electron microscopic study of some critical cheilostome bryozoan species of Arthur Waters from the Pleistocene of Brucoli (Siracusa, Sicily). Bollettino della Societa Paleontologica Italiana. ISSN 0375-7633. 61(3), p. 249–268. doi: 10.4435/BSPI.2022.06. Full text in Research Archive
  • Di Martino, Emanuela & Rosso, Antonietta (2021). Seek and ye shall find: new species and new records of Microporella (Bryozoa, Cheilostomatida) in the Mediterranean. ZooKeys. ISSN 1313-2989. 1053, p. 1–42. doi: 10.3897/zookeys.1053.65324. Full text in Research Archive
  • Lindberg, Diana; Kristoffersen, Kenneth Aase; de Vogel-van den Bosch, Heleen; Wubshet, Sileshi Gizachew; Böcker, Ulrike & Rieder, Anne [Show all 8 contributors for this article] (2021). Effects of poultry raw material variation and choice of protease on protein hydrolysate quality. Process Biochemistry. ISSN 1359-5113. 110, p. 85–93. doi: 10.1016/j.procbio.2021.07.014. Full text in Research Archive

View all works in Cristin

  • Porto, Arthur & Di Martino, Emanuela (2023). LEVERAGING METRIC LEARNING FOR ROBUST IMAGE CLASSIFICATION: A CASE STUDY ON CHEILOSTOME BRYOZOANS.
  • Di Martino, Emanuela (2023). Taxonomic insights from bryozoan historical collections: Lars Silén’s type specimens in Swedish natural history museums .
  • Di Martino, Emanuela (2023). Moss-animals: charming obscure creatures you'll like to know.
  • Di Martino, Emanuela & Porto, Arthur (2023). DeepBryo: a web app for bryozoan AI-assisted morphometric characterization .
  • Di Martino, Emanuela; Porto, Arthur & Liow, Lee Hsiang (2023). A cheilostome bryozoan story of fitness and phenotypes across two million years.
  • Di Martino, Emanuela (2023). A walk through the fascinating world of BRYOZOANS: what they can tell us about the past? .
  • Ramsfjell, Mali Hamre; Taylor, Paul D. & Di Martino, Emanuela (2022). New early Miocene species of the cheilostome bryozoan Microporella from the South Island of New Zealand.
  • Di Martino, Emanuela & Liow, Lee Hsiang (2022). Changing allometric relationships among fossil and Recent populations of two species of Microporella from New Zealand.
  • Chowdhury, Ismael; Lee, Hannah E.; Craig, Sean & Di Martino, Emanuela (2022). BRYOZOANS OF THE ROCKY OUTER COAST OF CALIFORNIA: DIVERSITY AND DISTRIBUTION.
  • Di Martino, Emanuela; Berning, Björn; Gordon, Dennis P.; Kuklinski, Piotr; Liow, Lee Hsiang & Ramsfjell, Mali Hamre [Show all 11 contributors for this article] (2022). DeepBryo: a web app for AI-assisted morphometric characterization of cheilostome bryozoan colonies.
  • Liow, Lee Hsiang & Di Martino, Emanuela (2022). THE EVOLUTION OF ALLOMETRY OF MODULES IN CHEILOSTOME BRYOZOANS.
  • Di Martino, Emanuela & Liow, Lee Hsiang (2022). A time-calibrated molecular phylogeny of cheilostome bryozoans to quantify previously inferred macroevolutionary relationships .
  • Di Martino, Emanuela (2021). Meet the moss-animals.
  • Di Martino, Emanuela & Liow, Lee Hsiang (2021). Static and evolutionary allometry in multiple temporal populations of closely related cheilostome bryozoan species.
  • Di Martino, Emanuela (2021). Fossil bryozoans and their future role in paleontology.
  • Di Martino, Emanuela & Liow, Lee Hsiang (2021). Static and evolutionary allometry in multiple temporal populations of closely related cheilostome bryozoan species.

View all works in Cristin

Published Apr. 12, 2022 8:26 AM - Last modified May 25, 2022 11:55 AM